5Y2E
Crystal structure of the oligomerization domain of NSP4 from the rotavirus strain NCDV
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2008-08-27 |
Detector | MAR scanner 345 mm plate |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.350, 48.140, 122.610 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.380 - 2.700 |
R-factor | 0.2389 |
Rwork | 0.237 |
R-free | 0.27350 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.018 |
RMSD bond angle | 1.728 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 61.380 |
High resolution limit [Å] | 2.700 |
Number of reflections | 7012 |
<I/σ(I)> | 8.8 |
Completeness [%] | 94.2 |
Redundancy | 4 |
CC(1/2) | 0.998 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 5.6 | 289 | 0.1M tri-Sodium citrate dehydrate, 0.5M ammonium sulfate, 1.0M lithium sulfate monohydrate |