5Y0T
Crystal structure of Thermotoga maritima TmcAL bound with alpha-thio ATP(Form II)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 95 |
Detector technology | PIXEL |
Collection date | 2014-12-25 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 80.618, 97.813, 144.605 |
Unit cell angles | 90.00, 99.28, 90.00 |
Refinement procedure
Resolution | 47.571 - 1.900 |
R-factor | 0.1721 |
Rwork | 0.170 |
R-free | 0.20330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5y0r |
RMSD bond length | 0.007 |
RMSD bond angle | 1.096 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.950 | |
High resolution limit [Å] | 1.900 | 8.500 | 1.900 |
Rmerge | 0.113 | 0.021 | 1.415 |
Rmeas | 0.122 | 0.023 | 1.532 |
Number of reflections | 170997 | 2019 | 12435 |
<I/σ(I)> | 14.32 | 70.69 | 1.34 |
Completeness [%] | 98.1 | 98.8 | 96.6 |
Redundancy | 7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | Tris, PEG8000, NaCl |