5XV4
Crystal structure of ATG101-ATG13HORMA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NE3A |
Synchrotron site | Photon Factory |
Beamline | AR-NE3A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-04 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 1 2 1 |
Unit cell lengths | 101.287, 125.356, 174.618 |
Unit cell angles | 90.00, 95.69, 90.00 |
Refinement procedure
Resolution | 35.782 - 2.950 |
R-factor | 0.2867 |
Rwork | 0.286 |
R-free | 0.31280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xuy |
RMSD bond length | 0.003 |
RMSD bond angle | 0.585 |
Data scaling software | HKL-2000 |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.000 |
High resolution limit [Å] | 2.950 | 8.000 | 2.950 |
Rmerge | 0.089 | 0.048 | 0.579 |
Rmeas | 0.104 | 0.056 | 0.682 |
Rpim | 0.054 | 0.028 | 0.355 |
Total number of observations | 317835 | ||
Number of reflections | 89076 | ||
<I/σ(I)> | 5.6 | ||
Completeness [%] | 97.6 | 98.9 | 94.4 |
Redundancy | 3.6 | 3.8 | 3.4 |
CC(1/2) | 0.997 | 0.956 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1M HEPES (pH7.5), 0.2M MgCl2, 6-8% (w/v) PEG 3350 |