5XV2
Crystal structure of Rib7 mutant D33A from Methanosarcina mazei
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 110 |
Detector technology | CCD |
Collection date | 2008-08-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 70.147, 70.147, 217.458 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 19.907 - 2.000 |
R-factor | 0.23579 |
Rwork | 0.235 |
R-free | 0.25172 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5xux |
RMSD bond length | 0.010 |
RMSD bond angle | 1.585 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.070 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.744 | |
Number of reflections | 22298 | 43100 |
<I/σ(I)> | 65.9 | 4.9 |
Completeness [%] | 99.9 | 100 |
Redundancy | 20.7 | 20 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | 20-25 % Tacsimate (pH 7.0), 2 % PEG 3350, and 100 mM HEPES (pH 7.0) |