5XQ3
Crystal structure of a PL 26 exo-rhamnogalacturonan lyase from Penicillium chrysogenum
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL26B2 |
Synchrotron site | SPring-8 |
Beamline | BL26B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-10-20 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.979 |
Spacegroup name | P 42 21 2 |
Unit cell lengths | 167.471, 167.471, 172.289 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 120.090 - 2.850 |
R-factor | 0.17329 |
Rwork | 0.171 |
R-free | 0.23656 |
Structure solution method | SAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.637 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0151) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 120.090 | 2.900 |
High resolution limit [Å] | 2.850 | 2.850 |
Rmerge | 0.117 | |
Number of reflections | 57725 | 2860 |
<I/σ(I)> | 33 | 3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 20 | 15 |
CC(1/2) | 0.886 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 2.9 M Sodium Acetate |