5XK2
Crystal structure of mono- and diacylglycerol lipase from Aspergillus oryzae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-20 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.978530 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 47.329, 67.277, 89.574 |
Unit cell angles | 90.00, 95.21, 90.00 |
Refinement procedure
Resolution | 33.973 - 1.695 |
R-factor | 0.1422 |
Rwork | 0.141 |
R-free | 0.16830 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.236 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (phenix.refine: 1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 33.973 | 33.973 | 1.800 |
High resolution limit [Å] | 1.695 | 5.060 | 1.700 |
Rmerge | 0.051 | 0.041 | 0.117 |
Rmeas | 0.055 | 0.045 | 0.130 |
Number of reflections | 61241 | 2421 | 9058 |
<I/σ(I)> | 24.16 | 40.23 | 9.35 |
Completeness [%] | 98.5 | 99.8 | 90.9 |
Redundancy | 6.496 | 6.581 | 5.128 |
CC(1/2) | 0.999 | 0.998 | 0.989 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 0.1M Bis-Tris pH 6.5, 45% polypropylene glycol P 400, VAPOR DIFFUSION SITTING DROP, temperature 293K |