Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5XHU

Crystal structure of ycgT from bacillus subtilis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL38B1
Synchrotron siteSPring-8
BeamlineBL38B1
Temperature [K]100
Detector technologyCCD
Collection date2016-05-29
DetectorRAYONIX MX225HE
Wavelength(s)1.0000
Spacegroup nameC 2 2 2
Unit cell lengths72.371, 164.598, 76.576
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.720 - 2.100
R-factor0.203
Rwork0.201
R-free0.23410
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.010
RMSD bond angle1.415
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwareREFMAC (5.7.0032)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.140
High resolution limit [Å]2.1005.7002.100
Rmerge0.0850.0210.830
Rmeas0.0920.0230.893
Rpim0.0340.0090.328
Number of reflections27133
<I/σ(I)>8.9
Completeness [%]100.099.699.9
Redundancy7.26.47.3
CC(1/2)0.9990.892
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.1M Tris buffer pH 8.6, 0.2 M tri-Sodium citrate, and 40% PEG400

227344

PDB entries from 2024-11-13

PDB statisticsPDBj update infoContact PDBjnumon