5XH2
Crystal structure of a novel PET hydrolase R103G/S131A mutant in complex with pNP from Ideonella sakaiensis 201-F6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-04-16 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 0.9998 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 50.784, 51.532, 84.373 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 - 1.200 |
R-factor | 0.0997 |
Rwork | 0.098 |
R-free | 0.12460 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4wfi |
RMSD bond length | 0.011 |
RMSD bond angle | 1.489 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.000 | 25.000 | 1.240 |
High resolution limit [Å] | 1.200 | 2.580 | 1.200 |
Rmerge | 0.050 | 0.036 | 0.212 |
Rmeas | 0.053 | 0.038 | 0.228 |
Rpim | 0.019 | 0.014 | 0.081 |
Number of reflections | 69716 | ||
<I/σ(I)> | 10 | ||
Completeness [%] | 99.8 | 99.9 | 98.9 |
Redundancy | 8 | 7.8 | 7.6 |
CC(1/2) | 0.999 | 0.982 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | Ammonium Sulfate, NaCl, HEPES |