Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5XCR

Crystal structure of P20.1 Fv-clasp fragment with its antigen peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL44XU
Synchrotron siteSPring-8
BeamlineBL44XU
Temperature [K]100
Detector technologyCCD
Collection date2014-10-04
DetectorRAYONIX MX300HE
Wavelength(s)0.9
Spacegroup nameP 1 21 1
Unit cell lengths55.060, 80.660, 85.700
Unit cell angles90.00, 90.92, 90.00
Refinement procedure
Resolution46.660 - 1.750
R-factor0.17235
Rwork0.171
R-free0.20224
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5xcq
RMSD bond length0.012
RMSD bond angle1.548
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]46.6601.860
High resolution limit [Å]1.7501.750
Number of reflections75053
<I/σ(I)>16.693.22
Completeness [%]99.999.2
Redundancy7.67.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION2930.1M Citrate (pH 5.5), 20%(w/v) PEG3000

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon