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5XCJ

Crystal structure of Vps29 single mutant (D62A) from Entamoeba histolytica

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]100
Detector technologyCCD
Collection date2016-09-25
DetectorMAR CCD 165 mm
Wavelength(s)0.95
Spacegroup nameP 1 21 1
Unit cell lengths35.428, 67.364, 77.931
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.729 - 1.859
R-factor0.2108
Rwork0.206
R-free0.21960
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5xce
RMSD bond length0.007
RMSD bond angle1.305
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155))
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]1.850
Number of reflections30853
<I/σ(I)>8.5
Completeness [%]100.0
Redundancy4.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5289200 mM Sodium Acetate, 100mM Sodium cacodylate pH 6.5, 30% PEG 8K

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PDB entries from 2024-07-17

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