5XCB
X-ray structure of domains D1 and D2 of Clostridium perfringens pili protein CppA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2016-11-02 |
Detector | RIGAKU RAXIS VII |
Wavelength(s) | 1.5418 |
Spacegroup name | C 2 2 2 |
Unit cell lengths | 90.400, 141.330, 61.480 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.760 - 2.140 |
R-factor | 0.21325 |
Rwork | 0.211 |
R-free | 0.25123 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.085 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 18.760 | 2.200 |
High resolution limit [Å] | 2.140 | 2.140 |
Rmerge | 0.052 | 0.487 |
Number of reflections | 22094 | |
<I/σ(I)> | 22.86 | 4.01 |
Completeness [%] | 99.7 | 99.8 |
Redundancy | 6.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.06M Magnesium chloride hexahydrate, 0.06M Calcium chloride dihydrate, 0.1M Tris (base), 0.1M BICINE, 20% v/v PEG 500* MME, 10 % w/v PEG 20000 |