Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5X9Y

Crystal structure of the ATPase domain from bacterial mismatch repair endonuclease Aquifex aeolicus MutL.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL38B1
Synchrotron siteSPring-8
BeamlineBL38B1
Temperature [K]100
Detector technologyCCD
Collection date2016-12-07
DetectorRAYONIX MX-225
Wavelength(s)1.0000
Spacegroup nameI 21 21 21
Unit cell lengths126.929, 145.253, 176.769
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.050 - 3.443
R-factor0.2597
Rwork0.256
R-free0.29540
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1bkn
RMSD bond length0.002
RMSD bond angle0.587
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.10.1_2155))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]43.0503.570
High resolution limit [Å]3.4403.440
Rmerge0.1341.008
Rpim0.0540.397
Number of reflections218391053
<I/σ(I)>16.32.13
Completeness [%]100.0100
Redundancy7.27.4
CC(1/2)0.725
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.529350 mM Bis-Tris 1.5 M sodium chloride 25% PEG3350

248335

PDB entries from 2026-01-28

PDB statisticsPDBj update infoContact PDBjnumon