5X94
Crystal structure of SHP2_SH2-CagA EPIYA_D peptide complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-5A |
Synchrotron site | Photon Factory |
Beamline | BL-5A |
Temperature [K] | 95 |
Detector technology | CCD |
Collection date | 2014-05-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 28.184, 121.968, 72.171 |
Unit cell angles | 90.00, 101.26, 90.00 |
Refinement procedure
Resolution | 70.781 - 2.600 |
R-factor | 0.1632 |
Rwork | 0.157 |
R-free | 0.24590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4dgp |
RMSD bond length | 0.008 |
RMSD bond angle | 1.051 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.10.1_2155)) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 70.800 |
High resolution limit [Å] | 2.600 |
Number of reflections | 28721 |
<I/σ(I)> | 18.7 |
Completeness [%] | 98.9 |
Redundancy | 3.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 31% PEG 4000, 0.1 M Tris-HCl |