5X4S
Structure of the N-terminal domain (NTD)of SARS-CoV spike protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-21 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.039 |
Spacegroup name | P 61 2 2 |
Unit cell lengths | 73.291, 73.291, 240.263 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.312 - 2.200 |
R-factor | 0.2535 |
Rwork | 0.252 |
R-free | 0.28240 |
RMSD bond length | 0.003 |
RMSD bond angle | 0.742 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.10.1_2155: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Number of reflections | 20329 | 1980 |
<I/σ(I)> | 14.6 | 5.9 |
Completeness [%] | 99.4 | 100 |
Redundancy | 11.1 | 14.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 1.3 M Na/K hydrogen phosphate |