5X4R
Structure of the N-terminal domain (NTD) of MERS-CoV spike protein
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-21 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.039 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 51.615, 86.609, 88.098 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.338 - 1.500 |
R-factor | 0.1641 |
Rwork | 0.163 |
R-free | 0.19460 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.958 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SHELXD |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.550 |
High resolution limit [Å] | 1.500 | 1.500 |
Number of reflections | 64228 | 6330 |
<I/σ(I)> | 27.6 | 1.6 |
Completeness [%] | 99.7 | 99.7 |
Redundancy | 8.4 | 8.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 291 | 0.2 M Magnesium chloride hexahydrate, 0.1 M BIS-TRIS, 25% w/v Polyethylene glycol 3350 |