5X4L
Crystal structure of the UBX domain of human UBXD7 in complex with p97 N domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-23 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.9777 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 63.046, 84.822, 109.230 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.920 - 2.402 |
R-factor | 0.1874 |
Rwork | 0.185 |
R-free | 0.23430 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3qq7 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.265 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | |
Low resolution limit [Å] | 45.920 |
High resolution limit [Å] | 2.400 |
Rmerge | 0.109 |
Rpim | 0.031 |
Number of reflections | 23521 |
<I/σ(I)> | 27 |
Completeness [%] | 100.0 |
Redundancy | 6.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 289 | 0.2M Calcium acetate hydrate pH7.5, 20% v/v PEG 3350 |