5WPN
Zn-bound Structure of Chaetopterus variopedatus Ferritin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-01-14 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 181.870, 181.870, 181.870 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.467 - 1.570 |
R-factor | 0.1394 |
Rwork | 0.138 |
R-free | 0.16280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | homology model |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 90.940 | 1.600 |
High resolution limit [Å] | 1.570 | 1.570 |
Rmerge | 0.095 | 0.803 |
Number of reflections | 36446 | 296 |
<I/σ(I)> | 24.9 | 2.2 |
Completeness [%] | 99.9 | 98.6 |
Redundancy | 25.1 | 5.6 |
CC(1/2) | 0.985 | 0.568 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 297 | Reservoir: 500 uL total volume: 20 mM Tris (pH 8.5), 40 mM CaCl2, 6% PEG 400 Sitting Drop: 2 uL reservoir, 2 uL of 25 uM Chaetopterus variopedatus ferritin Soaking Solution (30 min): 10 mM Zn, 20 mM Tris (pH 8.5), 20 mM CaCl2, and 3% (v/v) PEG 400 |