5WNR
Crystal Structure of 30S ribosomal subunit from Thermus thermophilus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-04-14 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.98 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 400.000, 400.000, 173.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.981 - 3.500 |
R-factor | 0.2148 |
Rwork | 0.214 |
R-free | 0.25550 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.002 |
RMSD bond angle | 0.564 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.981 | 29.981 | 2.990 |
High resolution limit [Å] | 2.920 | 13.040 | 2.920 |
Rmerge | 1.184 | 0.049 | |
Rmeas | 1.193 | 0.050 | |
Total number of observations | 20736692 | ||
Number of reflections | 296921 | 3550 | 19226 |
<I/σ(I)> | 6.04 | 77.03 | 0.46 |
Completeness [%] | 98.4 | 95.2 | 86.8 |
Redundancy | 69.839 | 63.023 | 31.482 |
CC(1/2) | 0.998 | 1.000 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6.5 | 298 | 17% MPD |