5WMQ
Crystal Structure of HLA-B8 in complex with ELR, an Influenza A virus peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-02-19 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.954 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 89.529, 38.553, 128.095 |
Unit cell angles | 90.00, 101.78, 90.00 |
Refinement procedure
Resolution | 20.500 - 1.400 |
R-factor | 0.1995 |
Rwork | 0.199 |
R-free | 0.21600 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.080 |
Data reduction software | XDS |
Data scaling software | Aimless (0.3.11) |
Phasing software | PHASER |
Refinement software | BUSTER (2.10.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 43.820 | 43.820 | 1.420 |
High resolution limit [Å] | 1.400 | 7.670 | 1.400 |
Rmerge | 0.028 | 0.355 | |
Rpim | 0.041 | 0.213 | |
Number of reflections | 82282 | 531 | 3953 |
<I/σ(I)> | 10.7 | ||
Completeness [%] | 97.0 | 92.7 | 94.5 |
Redundancy | 3.4 | 3.1 | 3.7 |
CC(1/2) | 0.997 | 0.886 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 18-24%PEG4000, 0.2 NH4 Acetate, 0.1M Na-cacodylate pH 6.5 |