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5WJS

Crystal structure of oxidoreductase (short chain dehydrogenase/reductase family) from Burkholderia thailandensis complexed with NADH

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E+ SUPERBRIGHT
Temperature [K]100
Detector technologyCCD
Collection date2017-01-11
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5418
Spacegroup nameP 43 21 2
Unit cell lengths123.030, 123.030, 86.680
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.453 - 2.150
R-factor0.1624
Rwork0.160
R-free0.19990
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4lvu
RMSD bond length0.007
RMSD bond angle0.848
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER (2.7.18)
Refinement softwarePHENIX ((1.12rc1_2807))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]46.45346.4532.210
High resolution limit [Å]2.1509.6202.150
Rmerge0.0840.0300.527
Rmeas0.0900.0320.572
Number of reflections367354922657
<I/σ(I)>15.8639.873.71
Completeness [%]99.99899.8
Redundancy8.2447.2346.662
CC(1/2)0.9990.9990.885
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP9290ButhA.00010.g.B1.PS01774 @ 20.96 mg/mL with 4mM NAD incubated at 16C; 28599c10 = JCSG+ C10: 0.1 M BICINE, pH 9.0, 10 % w/v PEG 20,000, 2 % v/v 1,4-Dioxane: Cryo = 25% EG: puck zvu9-7

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