5WJD
Crystal structure of Naa80 bound to acetyl-CoA
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 23-ID-D |
| Synchrotron site | APS |
| Beamline | 23-ID-D |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-03-17 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.03319 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 41.685, 62.643, 63.758 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 44.684 - 2.001 |
| R-factor | 0.1876 |
| Rwork | 0.184 |
| R-free | 0.22230 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2cnm |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.744 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.030 |
| High resolution limit [Å] | 2.000 | 5.430 | 2.000 |
| Rmerge | 0.177 | 0.080 | 0.756 |
| Rmeas | 0.185 | 0.084 | 0.797 |
| Rpim | 0.052 | 0.024 | 0.245 |
| Total number of observations | 144411 | ||
| Number of reflections | 11715 | 672 | 575 |
| <I/σ(I)> | 4.7 | ||
| Completeness [%] | 99.5 | 99.9 | 99.8 |
| Redundancy | 12.3 | 11.5 | 10 |
| CC(1/2) | 0.998 | 0.779 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 293.15 | 24% polyethylene glycol (PEG) 3350, 0.1 M Bis Tris propane (pH 7.6, pH adjusted with citric acid) and 10 mM NaBr |
