5WI7
Structure of Acinetobacter baumannii carbapenemase OXA-239 K82D bound to doripenem
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-06-16 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 99.017, 143.895, 44.563 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 1.861 |
R-factor | 0.20045 |
Rwork | 0.200 |
R-free | 0.21839 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4k0x |
RMSD bond length | 0.008 |
RMSD bond angle | 1.347 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 81.570 | 1.867 |
High resolution limit [Å] | 1.861 | 1.861 |
Rmerge | 0.102 | 0.784 |
Number of reflections | 54365 | 546 |
<I/σ(I)> | 10.2 | 2.1 |
Completeness [%] | 99.9 | 99.5 |
Redundancy | 6.1 | 6 |
CC(1/2) | 0.994 | 0.767 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.2 | 298 | 100 mM NaH2PO4, 100 mM citric acid, 200 mM NaCl, 20% PEG 8000, pH 4.2 |