Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5WHX

PREPHENATE DEHYDROGENASE FROM SOYBEAN

Replaces:  5T8X
Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyCCD
Collection date2015-07-09
DetectorADSC QUANTUM 315r
Wavelength(s)0.98
Spacegroup nameP 1
Unit cell lengths46.002, 55.275, 67.942
Unit cell angles107.44, 98.91, 103.23
Refinement procedure
Resolution32.410 - 1.690
R-factor0.155
Rwork0.153
R-free0.18200
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5t9e
RMSD bond length0.007
RMSD bond angle1.171
Data reduction softwareHKL-3000
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.4101.720
High resolution limit [Å]1.6901.690
Rmerge0.0570.510
Number of reflections646873130
<I/σ(I)>13.771.1
Completeness [%]97.094.6
Redundancy1.96
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP27720% PEG-4000 AND 100 MM SODIUM CITRATE, PH 5.5 WITH 30% (W/V) D-SORBITOL AS AN ADDITIVE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon