5WHN
Crystal structure of the segment, NFGAFS, from the low complexity domain of TDP-43, residues 312-317
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-20 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 13.820, 4.850, 46.740 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 13.253 - 1.100 |
R-factor | 0.136 |
Rwork | 0.133 |
R-free | 0.16010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3dgj |
RMSD bond length | 0.006 |
RMSD bond angle | 0.950 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (dev_1555) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 13.253 | 13.253 | 1.140 |
High resolution limit [Å] | 1.100 | 4.110 | 1.100 |
Rmerge | 0.172 | 0.094 | 0.726 |
Rmeas | 0.184 | 0.103 | 0.789 |
Total number of observations | 12008 | ||
Number of reflections | 1447 | 38 | 123 |
<I/σ(I)> | 9.65 | 15.95 | 2.52 |
Completeness [%] | 94.0 | 92.7 | 75.9 |
Redundancy | 8.299 | 5.763 | 6.374 |
CC(1/2) | 0.991 | 0.989 | 0.823 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.2 | 298 | 100mM phosphate/citrate 4.2, 40% ethanol, 5% PEG 1000 |