5WEC
Structure of an alternative pilotin from the type II secretion system of Vibrio cholerae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-12 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.890, 60.120, 73.830 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.619 - 1.563 |
R-factor | 0.1834 |
Rwork | 0.182 |
R-free | 0.20890 |
Structure solution method | SAD |
RMSD bond length | 0.004 |
RMSD bond angle | 0.725 |
Data reduction software | XDS (VERSION Jun 1, 2017 BUILT=20170601) |
Data scaling software | XSCALE (VERSION Jun 1, 2017 BUILT=20170601) |
Phasing software | PHASER (2.8.0) |
Refinement software | PHENIX (1.12rc1_2815) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 46.619 | 46.619 | 1.600 |
High resolution limit [Å] | 1.560 | 6.990 | 1.560 |
Rmerge | 0.099 | 0.060 | 0.954 |
Rmeas | 0.108 | 0.066 | 1.092 |
Number of reflections | 34736 | 456 | 2082 |
<I/σ(I)> | 10.55 | 24.03 | 1.38 |
Completeness [%] | 98.5 | 99.1 | 82.2 |
Redundancy | 6.347 | 5.75 | 3.98 |
CC(1/2) | 0.996 | 0.996 | 0.521 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 294 | 0.1M HEPES PH 6.5, 10% PEG6000, FINAL PH 7.0 |