5WDW
Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 10k (SRI-30027)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-07 |
Detector | RAYONIX MX300-HS |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 90.744, 90.744, 135.876 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.083 - 2.300 |
R-factor | 0.2425 |
Rwork | 0.240 |
R-free | 0.28540 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.533 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.380 |
High resolution limit [Å] | 2.300 | 4.950 | 2.300 |
Rmerge | 0.054 | 0.034 | 0.758 |
Rmeas | 0.058 | 0.036 | 0.810 |
Rpim | 0.018 | 0.012 | 0.279 |
Total number of observations | 121889 | ||
Number of reflections | 12942 | ||
<I/σ(I)> | 12 | ||
Completeness [%] | 99.3 | 95.3 | 98.4 |
Redundancy | 9.4 | 8.9 | 7.8 |
CC(1/2) | 0.999 | 0.842 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9.5 | 291 | 0.1 M CAPSO pH 9.5, 1 M Ammonium Sulfate, 10 mM MnCl2, 10 mM MgCl2 |