5WDI
Structure of Human Sts-2 histidine phosphatase domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-11-08 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 77.507, 113.115, 60.994 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 63.940 - 2.430 |
R-factor | 0.2058 |
Rwork | 0.203 |
R-free | 0.25010 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3d4i |
RMSD bond length | 0.005 |
RMSD bond angle | 1.006 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.470 |
High resolution limit [Å] | 2.430 | 6.590 | 2.430 |
Rmerge | 0.092 | 0.024 | 0.568 |
Rmeas | 0.107 | 0.029 | 0.671 |
Rpim | 0.055 | 0.015 | 0.353 |
Total number of observations | 74181 | ||
Number of reflections | 20513 | 958 | |
<I/σ(I)> | 7.7 | ||
Completeness [%] | 98.3 | 98.9 | 94.2 |
Redundancy | 3.6 | 3.4 | 3.4 |
CC(1/2) | 0.999 | 0.745 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 291 | 0.1 M HEPES, pH 7.0 22% PEG 4000 0.2 M potassium acetate 0.2 M lithium sulfate |