5WDC
Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 9e (SRI-29843)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-02-12 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 90.777, 90.777, 134.545 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.866 - 2.100 |
R-factor | 0.2196 |
Rwork | 0.218 |
R-free | 0.24220 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.562 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.180 |
High resolution limit [Å] | 2.100 | 4.520 | 2.100 |
Rmerge | 0.059 | 0.029 | 0.986 |
Rmeas | 0.063 | 0.032 | 1.067 |
Rpim | 0.022 | 0.011 | 0.398 |
Number of reflections | 16686 | ||
<I/σ(I)> | 11.7 | ||
Completeness [%] | 99.1 | 98.6 | 93 |
Redundancy | 7.7 | 7.5 | 6.4 |
CC(1/2) | 0.998 | 0.729 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 291 | 0.1 M HEPES pH 7.8, 1.0 M Ammonium sulfate, 10 mM MnCl2, 10 mM MgCl2, 1% PVP K15 |