5WB3
Crystal structure of the influenza virus PA endonuclease in complex with inhibitor 10j (SRI-30026)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-02-09 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97903 |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 90.698, 90.698, 134.310 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 37.582 - 2.203 |
R-factor | 0.2165 |
Rwork | 0.215 |
R-free | 0.24170 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.583 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 4.740 | 2.200 |
Rmerge | 0.063 | 0.033 | 1.070 |
Rmeas | 0.068 | 0.036 | 1.148 |
Rpim | 0.024 | 0.014 | 0.410 |
Total number of observations | 113676 | ||
Number of reflections | 14550 | ||
<I/σ(I)> | 13 | ||
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 7.8 | 7.3 | 7.8 |
CC(1/2) | 0.997 | 0.776 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.8 | 291 | 0.1 M HEPES pH 7.8, 1.0 M Ammonium Sulfate, 10 mM MnCl2, 10 mM MgCl2, 1% PVP K15 |