Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5W8Q

Crystal structure of biphenyl synthase from Malus domestica

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.1
Synchrotron siteALS
Beamline8.2.1
Temperature [K]100
Detector technologyCCD
Collection date2010-02-12
DetectorADSC QUANTUM 315
Wavelength(s)0.99980
Spacegroup nameP 1 21 1
Unit cell lengths55.270, 113.020, 62.770
Unit cell angles90.00, 93.15, 90.00
Refinement procedure
Resolution27.917 - 1.173
R-factor0.0992
Rwork0.098
R-free0.12160
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1bi5
RMSD bond length0.012
RMSD bond angle1.421
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.16)
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.9_1692))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]62.67527.9171.240
High resolution limit [Å]1.1733.7101.173
Rmerge0.0840.0570.297
Rmeas0.0940.0620.378
Rpim0.0410.0260.231
Number of reflections251517
<I/σ(I)>11.310.61.4
Completeness [%]98.39894.2
Redundancy4.55.52.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.527814% PEG 8000, 0.3M Ammonium acetate, 0.1M sodium-HEPES pH7.5

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon