5W8M
Crystal structure of Chaetomium thermophilum Vps29
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-01 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 1.00 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 65.460, 106.740, 88.118 |
Unit cell angles | 90.00, 95.45, 90.00 |
Refinement procedure
Resolution | 45.594 - 1.520 |
R-factor | 0.1553 |
Rwork | 0.155 |
R-free | 0.17660 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1w24 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.296 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.800 | 1.550 |
High resolution limit [Å] | 1.520 | 1.520 |
Rmerge | 0.090 | 0.707 |
Rpim | 0.057 | 0.431 |
Number of reflections | 184667 | 8919 |
<I/σ(I)> | 9.9 | 2.1 |
Completeness [%] | 99.8 | 97.7 |
Redundancy | 7.5 | 7.2 |
CC(1/2) | 0.997 | 0.681 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 293 | 8% PEG20000, 8% PEG550MME, 0.2 M calcium acetate and 0.1 M Tris (pH 8.0) |