5W6I
Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with cyclic peptide CP141046 (P3)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2014-11-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | I 21 3 |
Unit cell lengths | 164.305, 164.305, 164.305 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.076 - 3.104 |
R-factor | 0.2103 |
Rwork | 0.208 |
R-free | 0.25530 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ru7 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.887 |
Data reduction software | HKL-2000 (v712) |
Data scaling software | HKL-2000 (v712) |
Phasing software | PHASER |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.150 |
High resolution limit [Å] | 3.100 | 3.100 |
Rpim | 0.030 | 0.260 |
Number of reflections | 13493 | 660 |
<I/σ(I)> | 43 | 4.3 |
Completeness [%] | 99.9 | 100 |
Redundancy | 13.8 | 13.5 |
CC(1/2) | 0.980 | 0.920 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 4 | 277 | HA: 11 mg/ml 1M lithium chloride 10% w/v PEG 6000 0.1M sodium citrate, pH=4.0 |