5W5U
Crystal structure of the A/Puerto Rico/8/1934 (H1N1) influenza virus hemagglutinin in complex with cyclic peptide CP141037 (P4)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 80 |
Detector technology | PIXEL |
Collection date | 2014-11-15 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | I 21 3 |
Unit cell lengths | 161.362, 161.362, 161.362 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.646 - 2.461 |
R-factor | 0.2119 |
Rwork | 0.210 |
R-free | 0.25100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ru7 |
RMSD bond length | 0.007 |
RMSD bond angle | 0.964 |
Data reduction software | HKL-2000 (v712) |
Data scaling software | HKL-2000 (v712) |
Phasing software | PHASER |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.500 |
High resolution limit [Å] | 2.460 | 2.460 |
Rpim | 0.040 | 0.440 |
Number of reflections | 25055 | 1249 |
<I/σ(I)> | 13.3 | 1.9 |
Completeness [%] | 98.4 | 100 |
Redundancy | 4.4 | 4.4 |
CC(1/2) | 0.930 | 0.650 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 277 | HA conc. 11 mg/ml 1M lithium chloride 10% w/v PEG 6000 0.1M sodium citrate, pH= 5.0 |