5W4Z
Crystal Structure of Riboflavin Lyase (RcaE) with modified FMN and substrate Riboflavin
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 23-ID-D |
| Synchrotron site | APS |
| Beamline | 23-ID-D |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2017-02-25 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 74.970, 108.800, 125.080 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 64.300 - 1.750 |
| R-factor | 0.178 |
| Rwork | 0.176 |
| R-free | 0.20700 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3b9o |
| RMSD bond length | 0.006 |
| RMSD bond angle | 0.853 |
| Data reduction software | iMOSFLM (7.2.1) |
| Data scaling software | iMOSFLM (7.2.1) |
| Phasing software | PHENIX (1.10.1-2155-000) |
| Refinement software | PHENIX (1.10.1-2155-000) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 64.300 | 1.750 |
| High resolution limit [Å] | 1.750 | 1.750 |
| Rmerge | 0.114 | 3.591 |
| Number of reflections | 102980 | |
| <I/σ(I)> | 9 | |
| Completeness [%] | 99.6 | 99.1 |
| Redundancy | 8.8 | 8.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 6 | 298 | 0.1 M Bis-Tris-HCl, 1.9 M ammonium sulfate |
