5VZN
Wild-type sperm whale myoglobin with nitric oxide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RUH3R |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-07-14 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54178 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 34.800, 29.260, 63.949 |
Unit cell angles | 90.00, 105.79, 90.00 |
Refinement procedure
Resolution | 26.420 - 1.700 |
R-factor | 0.1395 |
Rwork | 0.137 |
R-free | 0.19030 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2mbw |
RMSD bond length | 0.020 |
RMSD bond angle | 1.999 |
Data scaling software | Aimless (0.1.27) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 26.420 | 26.420 | 1.730 |
High resolution limit [Å] | 1.700 | 9.000 | 1.700 |
Rmerge | 0.030 | 0.015 | 0.099 |
Rmeas | 0.038 | 0.018 | 0.131 |
Rpim | 0.023 | 0.010 | 0.083 |
Total number of observations | 27315 | ||
Number of reflections | 11177 | ||
<I/σ(I)> | 30.1 | ||
Completeness [%] | 80.5 | 63 | 80 |
Redundancy | 2.4 | 2.5 | 2.2 |
CC(1/2) | 0.999 | 1.000 | 0.983 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M Tris-Hcl, 1 mM EDTA, pH 7.4 2.56 M Ammonium Sulfate |