5VX4
VP8* of a G2P[4] Human Rotavirus
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2015-09-17 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9774 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 34.330, 56.590, 37.310 |
Unit cell angles | 90.00, 93.52, 90.00 |
Refinement procedure
Resolution | 31.110 - 1.550 |
R-factor | 0.1734 |
Rwork | 0.171 |
R-free | 0.22100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2aen |
RMSD bond length | 0.007 |
RMSD bond angle | 1.050 |
Data reduction software | iMOSFLM (7.0.9) |
Data scaling software | SCALA (3.3.21) |
Phasing software | PHASER (2.5.5) |
Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 31.110 | |
High resolution limit [Å] | 1.550 | 1.550 |
Rmerge | 0.025 | 0.228 |
Rmeas | 0.025 | |
Rpim | 0.025 | 0.122 |
Number of reflections | 19627 | |
<I/σ(I)> | 18.61 | |
Completeness [%] | 94.5 | |
Redundancy | 2 | |
CC(1/2) | 0.999 | 0.954 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 9 | 293 | 0.1 M Bis-Tris propane, pH 9.0, 30% w/v PEG6000 |