5VWT
Crystal structure of oxidized Aspergillus fumigatus UDP-galactopyranose mutase complexed with NADPH
Replaces: 4GDCExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-03-24 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 218.292, 218.292, 319.216 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 162.662 - 2.750 |
R-factor | 0.2043 |
Rwork | 0.202 |
R-free | 0.23920 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 3utf |
RMSD bond length | 0.009 |
RMSD bond angle | 1.014 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 162.662 | 162.662 | 2.900 |
High resolution limit [Å] | 2.750 | 8.700 | 2.750 |
Rmerge | 0.035 | 0.885 | |
Rmeas | 0.147 | 0.037 | 0.967 |
Rpim | 0.054 | 0.012 | 0.382 |
Total number of observations | 851567 | ||
Number of reflections | 116001 | ||
<I/σ(I)> | 11.6 | 17.1 | 0.9 |
Completeness [%] | 99.9 | 99.5 | 99.9 |
Redundancy | 7.3 | 8.7 | 6.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 298 | 1.4 M ammonium sulfate, 0.1 M sodium acetate, pH 4.5 |