5VTQ
Crystal structure of the A/Hong Kong/1/1968 (H3N2) influenza virus hemagglutinin G225L/L226S mutant in complex with 3'-SLN
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-10-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.0331 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 209.960, 131.235, 72.250 |
Unit cell angles | 90.00, 98.62, 90.00 |
Refinement procedure
Resolution | 50.000 - 2.950 |
R-factor | 0.20305 |
Rwork | 0.202 |
R-free | 0.22776 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4fnk |
RMSD bond length | 0.008 |
RMSD bond angle | 1.282 |
Data scaling software | HKL-2000 (712) |
Phasing software | PHASER (2.5.6) |
Refinement software | REFMAC (5.8.0155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.050 |
High resolution limit [Å] | 2.950 | 2.950 |
Rpim | 0.090 | 0.370 |
Number of reflections | 41818 | 3661 |
<I/σ(I)> | 7.7 | 1.4 |
Completeness [%] | 99.0 | 95.2 |
Redundancy | 4.2 | 3.3 |
CC(1/2) | 0.980 | 0.580 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M sodium cacodylate pH 6.5, 5% PEG 8000, and 38% 2-methyl-2,4-pentanediol |