Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VTK

Structure of Pin1 WW Domain Variant 1 with beta3-Ser Loop Substitution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSEALED TUBE
Source detailsBRUKER IMUS MICROFOCUS
Temperature [K]100
Detector technologyCCD
Collection date2014-08-13
DetectorAPEX II CCD
Wavelength(s)0.72
Spacegroup nameP 65 2 2
Unit cell lengths47.629, 47.629, 60.741
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution34.120 - 1.990
R-factor0.1625
Rwork0.157
R-free0.22098
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5vtj
RMSD bond length0.019
RMSD bond angle1.860
Data reduction softwareXPREP
Data scaling softwareXPREP
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.1202.020
High resolution limit [Å]1.9901.990
Number of reflections3112126
<I/σ(I)>38.4111.27
Completeness [%]99.797.7
Redundancy40.824.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2980.1 M HEPES, pH 7.5, 4.3 M sodium chloride (Hampton CSII #36), crystal grew after ~6 months, treated with 4:1 (CS2 #36):glycerol prior to freezing in cryostream

234136

PDB entries from 2025-04-02

PDB statisticsPDBj update infoContact PDBjnumon