5VSZ
Structure of the Ubl domain of Sacsin mutant L78M
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | CHESS BEAMLINE F2 |
Synchrotron site | CHESS |
Beamline | F2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-03-11 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.97873, 0.97921 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 52.140, 61.450, 91.570 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.129 - 2.400 |
R-factor | 0.2215 |
Rwork | 0.218 |
R-free | 0.28420 |
Structure solution method | MAD |
RMSD bond length | 0.009 |
RMSD bond angle | 1.094 |
Data reduction software | DENZO |
Data scaling software | SCALA (3.3.16) |
Phasing software | SOLVE |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 45.785 | 30.725 | 2.530 |
High resolution limit [Å] | 2.400 | 7.590 | 2.400 |
Rmerge | 0.050 | 0.498 | |
Rmeas | 0.076 | 0.075 | 0.534 |
Rpim | 0.020 | 0.022 | 0.139 |
Total number of observations | 82884 | ||
Number of reflections | 5927 | ||
<I/σ(I)> | 24.8 | 12.5 | 1.5 |
Completeness [%] | 98.9 | 91.8 | 98.7 |
Redundancy | 14 | 10.5 | 14.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.6 | 293 | 0.1 M bicine, 0.25 M NaCl, 1 mM lead acetate, 10% glycerol, pH 8.6 |