Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VSL

Crystal structure of viperin with bound [4Fe-4S] cluster and S-adenosylhomocysteine (SAH)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2015-12-18
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9793
Spacegroup nameP 21 21 21
Unit cell lengths58.934, 73.854, 141.872
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution46.065 - 1.972
R-factor0.1571
Rwork0.155
R-free0.19970
Structure solution methodSAD
RMSD bond length0.015
RMSD bond angle2.008
Data scaling softwareHKL-2000
Phasing softwareSHELXD
Refinement softwarePHENIX ((1.11.1_2575: 000))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.040
High resolution limit [Å]1.9701.970
Rmerge0.0790.578
Number of reflections423314223
<I/σ(I)>12.62.4
Completeness [%]95.096.7
Redundancy5.24.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP295100 mM HEPES, pH 6.8 - 7.6, 10 - 30 % (w/v) PEG MME 2000, and 5 mM SAH

219140

PDB entries from 2024-05-01

PDB statisticsPDBj update infoContact PDBjnumon