5VQL
X-ray co-structure of nuclear receptor ROR-gammat Ligand Binding Domain with a inverse agonist and SRC2 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.1 |
Synchrotron site | ALS |
Beamline | 5.0.1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-13 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.977 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 61.325, 61.325, 155.578 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.000 - 2.700 |
R-factor | 0.22 |
Rwork | 0.218 |
R-free | 0.25100 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.930 |
Data reduction software | d*TREK (9.9.9.4L) |
Data scaling software | d*TREK (9.9.9.4L) |
Phasing software | PHENIX (1.8_1069) |
Refinement software | BUSTER (2.11.7) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.360 | 2.800 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.154 | 0.652 |
Number of reflections | 8619 | 848 |
<I/σ(I)> | 6 | 2.1 |
Completeness [%] | 99.0 | 98.83 |
Redundancy | 8.4 | 9.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 298 | PEG 4000 (2-8%), NACL 0.5M, PIPES (0.1M), PH 7.0 |