Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VQG

Crystal structure of the extended Tudor domain from BmPAPI

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007 HF
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2015-01-13
DetectorRIGAKU
Wavelength(s)1.5418
Spacegroup nameP 32 2 1
Unit cell lengths63.560, 63.560, 100.740
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution31.780 - 2.600
R-factor0.20571
Rwork0.201
R-free0.27705
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3fdr
RMSD bond length0.011
RMSD bond angle1.416
Data reduction softwareiMOSFLM
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwareREFMAC (5.8.0073)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]31.7802.720
High resolution limit [Å]2.6002.600
Rmerge0.1060.608
Number of reflections7535915
<I/σ(I)>7.81.6
Completeness [%]99.5100
Redundancy4.14
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2811% PEG 8,000, 50 mM MES, pH 5.5, 100 mM KCl and 10 mM MgCl2

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon