5VQD
Beta-glucoside phosphorylase BglX
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2016-06-10 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.54 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 80.520, 84.150, 161.190 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 33.127 - 2.100 |
R-factor | 0.208 |
Rwork | 0.204 |
R-free | 0.25690 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3BMX (Sculptor edited) |
RMSD bond length | 0.002 |
RMSD bond angle | 0.565 |
Data reduction software | HKL-3000 (HKL) |
Data scaling software | Aimless (CCP4 7.0) |
Phasing software | PHENIX ((dev_2481: ???)) |
Refinement software | PHENIX ((dev_2481: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 54.720 | 2.160 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.095 | 0.259 |
Number of reflections | 30635 | 2647 |
<I/σ(I)> | 18.6 | 8.6 |
Completeness [%] | 94.6 | 99.9 |
Redundancy | 10.1 | 10.3 |
CC(1/2) | 0.997 | 0.975 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | 27% PEG 1000 and 100 mM MES (pH 6.5) |