Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VQ5

Crystal Structure of the Lectin Domain From the F17-like Adhesin, UclD

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 4.2.2
Synchrotron siteALS
Beamline4.2.2
Temperature [K]100
Detector technologyCMOS
Collection date2016-05-16
DetectorRDI CMOS_8M
Wavelength(s)0.976
Spacegroup nameP 21 21 21
Unit cell lengths39.010, 58.600, 175.070
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution55.570 - 1.600
R-factor0.1739
Rwork0.172
R-free0.21810
Structure solution methodSAD
RMSD bond length0.002
RMSD bond angle0.582
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHENIX
Refinement softwarePHENIX (1.10_2155)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]55.5701.660
High resolution limit [Å]1.6001.600
Rmerge0.0530.430
Number of reflections108142
<I/σ(I)>17.681.43
Completeness [%]99.999.98
Redundancy22
CC(1/2)0.659
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29320% PEG 3350, 0.1 M KH2PO4, 0.2 M KI

222624

PDB entries from 2024-07-17

PDB statisticsPDBj update infoContact PDBjnumon