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5VPD

Transcription factor FosB/JunD bZIP domain in its oxidized form, type-III crystal

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2016-10-22
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.9787
Spacegroup nameP 21 21 2
Unit cell lengths92.008, 98.051, 50.251
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.720 - 2.790
R-factor0.2547
Rwork0.249
R-free0.30020
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5vpa
RMSD bond length0.003
RMSD bond angle0.585
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.11.1_2575)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]44.72044.7202.820
High resolution limit [Å]2.7907.5102.790
Rmerge0.1080.0330.906
Rmeas0.1160.0370.977
Rpim0.0430.0150.363
Number of reflections11778
<I/σ(I)>7.52
Completeness [%]99.998.4100
Redundancy7.16.27.1
CC(1/2)0.9990.902
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP629320% (v/v) 2-methyl-2,4-pentanediol (MPD), 0.1 M NaCl, 50 mM sodium cacodylate pH 6 and 10 mM spermine

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