5VPA
Transcription factor FosB/JunD bZIP domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-13 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.999 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 52.605, 95.352, 98.200 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.204 - 2.830 |
R-factor | 0.2484 |
Rwork | 0.245 |
R-free | 0.28280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fos |
RMSD bond length | 0.006 |
RMSD bond angle | 0.685 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 34.204 | 34.204 | 2.850 |
High resolution limit [Å] | 2.830 | 7.590 | 2.830 |
Rmerge | 0.096 | 0.061 | 1.167 |
Rmeas | 0.102 | 0.065 | 1.232 |
Rpim | 0.033 | 0.022 | 0.390 |
Number of reflections | 6010 | ||
<I/σ(I)> | 25 | 2.2 | |
Completeness [%] | 100.0 | 99.7 | 100 |
Redundancy | 9.5 | 8.7 | 9.5 |
CC(1/2) | 0.992 | 0.826 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 3 M 1,6-Hexanediol, 50 mM Tris pH 8.5 and 5 mM MgCl2 |