5VL4
Accidental minimum contact crystal lattice formed by a redesigned protein oligomer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-03-06 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.97920 |
Spacegroup name | I 21 3 |
Unit cell lengths | 138.380, 138.380, 138.380 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 97.850 - 4.100 |
R-factor | 0.215 |
Rwork | 0.210 |
R-free | 0.26400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1nog |
RMSD bond length | 0.011 |
RMSD bond angle | 1.240 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Refinement software | BUSTER (2.10.3) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 97.850 | 97.850 | 4.200 |
High resolution limit [Å] | 4.100 | 18.330 | 4.100 |
Rmerge | 0.147 | 0.064 | 0.776 |
Rmeas | 0.162 | 0.078 | 0.865 |
Total number of observations | 21295 | ||
Number of reflections | 3554 | 49 | 240 |
<I/σ(I)> | 6.57 | 15.68 | 2.31 |
Completeness [%] | 98.9 | 94.2 | 94.9 |
Redundancy | 5.992 | 6.102 | 4.983 |
CC(1/2) | 1.000 | 1.000 | 0.742 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 298 | 0.1M Na citrate pH 5.6, 2.5M 1,6-hexanediol, 0.01M manganese chloride |