Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5VKZ

Crystal structure of Mdm12 and combinatorial reconstitution of Mdm12/Mmm1 ERMES complexes for structural studies

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]83
Detector technologyPIXEL
Collection date2011-04-23
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.97918
Spacegroup nameP 32 2 1
Unit cell lengths116.020, 116.020, 161.660
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution85.340 - 4.100
R-factor0.24308
Rwork0.242
R-free0.25379
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)5gyd
RMSD bond length0.011
RMSD bond angle1.531
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]85.3004.210
High resolution limit [Å]4.1004.100
Rmerge0.1151.050
Number of reflections10272744
<I/σ(I)>9.42
Completeness [%]99.599.7
Redundancy7.47.5
CC(1/2)0.958
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP27715-25% PEG 3350, 400 mM ammonium phosphate, 3.5 mM Mega-10

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon