5VJS
De Novo Photosynthetic Reaction Center Protein Equipped with Heme B, a synthetic Zn porphyrin, and Zn(II) cations
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-20 |
Detector | ADSC QUANTUM 270 |
Wavelength(s) | 1.0781, 1.2824, 1.2831 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 43.749, 43.749, 245.737 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 61.430 - 2.000 |
R-factor | 0.2366 |
Rwork | 0.234 |
R-free | 0.27790 |
Structure solution method | MAD |
RMSD bond length | 0.018 |
RMSD bond angle | 1.829 |
Data reduction software | XDS (VERSION March 30, 2013) |
Data scaling software | XSCALE (VERSION July 4, 2012 BUILT=20130706) |
Phasing software | AutoSol |
Refinement software | REFMAC (5.8.0131) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 61.430 | 61.430 | 2.050 |
High resolution limit [Å] | 2.000 | 8.940 | 2.000 |
Rmerge | 0.085 | 0.027 | 0.970 |
Rmeas | 0.091 | 0.030 | 1.041 |
Number of reflections | 17105 | 239 | 1194 |
<I/σ(I)> | 16.8 | 49.61 | 2.52 |
Completeness [%] | 99.4 | 95.2 | 98.8 |
Redundancy | 7.603 | 5.77 | 7.409 |
CC(1/2) | 0.999 | 1.000 | 0.888 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.4 | 277 | 3.4 M NaCl, 100 mM Na acetate |